Bring config.template up to speed

classes/config.template

@@ -1,8 +1,8 @@
 <?php
+
 if (version_compare(PHP_VERSION, '7.0.0', '<')) {
-    die("Gazelle requires PHP 7.0.0 or later to function properly");
+    die('Gazelle requires PHP 7.0.0 or later to function properly');
 }
-//date_default_timezone_set('EST');
 
 // Main settings
 define('SITE_NAME',     'BioTorrents.de'); // The name of your site
@@ -11,17 +11,25 @@ define('IMAGE_DOMAIN',  'pics.biotorrents.de'); // The FQDN of your image host
 define('SERVER_ROOT',   '/var/www/html/biotorrents.de'); // The root of the server, used for includes
 define('TORRENT_STORE', '/var/www/torrents/'); // Where torrent files are stored
 
-// Tracker urls to be added to torrent files ala bittorrent.org/beps/bep_0012.html
-define('ANNOUNCE_URLS', [[
-  'https://track.biotorrents.de',
-  #'https://tracker2.'.SITE_DOMAIN.':34001',
-]]);
+// Tracker urls to be added to torrent files à la http://bittorrent.org/beps/bep_0012.html
+define('ANNOUNCE_URLS', [
+  [ # Tier 1
+    'https://track.biotorrents.de:443',
+  ],
+  [ # Tier 2
+    'udp://tracker.coppersurfer.tk:6969/announce',
+    'udp://tracker.cyberia.is:6969/announce',
+    'udp://tracker.leechers-paradise.org:6969/announce',
+  ]
+]);
 
 // Name for bonus points currency
 define('BONUS_POINTS', 'Bonus Points');
 
 // Don't hard code API keys for services
 define('API_KEYS', ['Entrez' => '000000000000000000000000000000000000']);
+define('SCI_HUB', 'se'); # https://lovescihub.wordpress.com
+#define('SCI_HUB', ['ren', 'tw', 'se']); # https://lovescihub.wordpress.com
 
 // Allows you to run static content off another server. Default is usually what you want.
 define('STATIC_SERVER', '/static/');
@@ -68,9 +76,10 @@ define('TRACKER_REPORTKEY', '00000000000000000000000000000000'); // Must be 32 c
 define('DEBUG_MODE',        false); // Set to false if you dont want everyone to see debug information, can be overriden with 'site_debug'
 define('DEBUG_WARNINGS',    true); // Set to true if you want to see PHP warnings in the footer
 define('OPEN_REGISTRATION', false); // Set to false to disable open regirstration, true to allow anyone to register
-define('USER_LIMIT',        100); // The maximum number of users the site can have, 0 for no limit
+define('USER_LIMIT',        30); // The maximum number of users the site can have, 0 for no limit
 define('STARTING_INVITES',  2); // # of invites to give to newly registered users
-define('STARTING_UPLOAD',   2147483648); // Amount of upload to give to newly registered users
+define('STARTING_TOKENS',   2); // # of freeleech tokens to give to newly registered users
+define('STARTING_UPLOAD',   5368709120); // Amount of upload to give to newly registered users
 define('BLOCK_TOR',         false); // Set to true to block Tor users
 define('BLOCK_OPERA_MINI',  false); // Set to true to block Opera Mini proxy
 define('DONOR_INVITES',     2);
@@ -86,26 +95,27 @@ define('FEATURE_SET_ENC_KEY_PUBLIC', false); // Allow the site encryption key to
 // User class IDs needed for automatic promotions. Found in the 'permissions' table
 // Name of class  Class ID (NOT level)
 define('ADMIN',          '1');
-define('USER',           '2'); # Called "Member" in the permissions manager; Hon'ble Membah
-define('MEMBER',         '0'); # Unused because the permissions are now flat
-define('POWER',          '0');
-define('ELITE',          '0');
-define('LEGEND',         '0');
+define('USER',           '2');
+define('MEMBER',         '3');
+define('POWER',          '4');
+define('ELITE',          '5');
+define('LEGEND',         '8');
 define('MOD',            '11');
 define('SYSOP',          '15');
-define('ARTIST',         '0');
-define('DONOR',          '20'); # Still in use for people who donate
-define('VIP',            '0');
-define('TORRENT_MASTER', '0');
-define('POWER_TM',       '0');
+define('ARTIST',         '19');
+define('DONOR',          '20');
+define('VIP',            '21');
+define('TORRENT_MASTER', '23');
+define('POWER_TM',       '24');
 define('FLS_TEAM',       '33');
 define('FORUM_MOD',      '9001');
 
 // Forums
-define('STAFF_FORUM',           0); # todo
-define('DONOR_FORUM',           0); # todo
+define('STAFF_FORUM',           3);
+define('DONOR_FORUM',           7);
 define('TRASH_FORUM_ID',        8);
 define('ANNOUNCEMENT_FORUM_ID', 1);
+define('SUGGESTIONS_FORUM_ID',  2);
 
 // Pagination
 define('TORRENT_COMMENTS_PER_PAGE', 10);
@@ -120,6 +130,7 @@ define('LOG_ENTRIES_PER_PAGE',      50);
 define('THREAD_CATALOGUE', 500); // Limit to THREAD_CATALOGUE posts per cache key.
 
 // IRC settings
+define('SLACK_INVITE',          '00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000');
 define('BOT_NICK',              'bot');
 define('BOT_SERVER',            'irc.'.SITE_DOMAIN); // IRC server address. Used for onsite chat tool.
 define('BOT_PORT',              6667);
@@ -158,34 +169,145 @@ define('FORUMS_TO_ALLOW_DOUBLE_POST', []);
 
 $Categories = [
   'DNA',
-  'mRNA',
-  'rRNA',
-  'tRNA',
+  'RNA',
   'Protein',
-  'Other',
+  'Imaging',
+  'Extras',
 ];
 $GroupedCategories = $Categories;
 #$CategoryIcons = ['music.png', 'apps.png', 'ebook.png', 'audiobook.png', 'elearning.png', 'comedy.png', 'comics.png'];
 
 $Media = [
-  'Sanger',
-  'Shotgun',
-  'Illumina',
-  'PacBio',
+  # DNA
+  'Complete Genomics',
+  'cPAS-BGI/MGI',
+  'Helicos',
+  'Illumina HiSeq',
+  'Illumina MiSeq',
+  'Ion Torrent',
+  'Microfluidics',
   'Nanopore',
+  'PacBio',
+  'Roche 454',
+  'Sanger',
+  'SOLiD',
+
+  # RNA, Protein, etc.
+  'De Novo',
+  'HPLC',
+  'Mass Spec',
+  'RNA-Seq',
+  'Other',
+];
+
+# Imaging Platforms
+$MediaManga = [
+  'CT/CAT',
+  'ECG',
+  'Elastography',
+  'FNIR/NIRS',
+  'MPI',
+  'MRI/NMR',
+  'Microscopy',
+  'Photoacoustic',
+  'Photography',
+  'Scint/SPECT/PET',
+  'Ultrasound',
+  'X-Rays',
   'Other',
 ];
-#$MediaManga = ['Scan', 'Web'];
+
 #$Platform = ['Windows', 'OS X', 'Linux', 'BSD', 'Flash', 'Java', 'Android', 'iOS', '3DS'];
+
+# Sequencing Formats
+# https://www.ncbi.nlm.nih.gov/sra/docs/submitformats/
 $Containers = [
-  'EMBL',
-  'FASTA',
-  'GenBank',
-  'PIR',
-  'SwissProt',
-  'Plain',
+  'Autofill'   => ['Autofill'],
+  'BAM'        => ['bam'],
+  'CRAM'       => ['cram'],
+  'EMBL'       => ['embl'],
+  'FASTA'      => ['fa', 'fasta', 'fsa'],
+  'FASTA+QUAL' => ['qual'],
+  'CSFASTA'    => ['csfa', 'csfasta', 'csfsa'],
+  'FASTQ'      => ['fastq', 'fq', 'sanfastq'],
+  'GFF'        => ['gff', 'gff2', 'gff3'],
+  'GTF'        => ['gtf'],
+  'GenBank'    => ['gb', 'gbk', 'genbank'],
+  'HDF5'       => ['bash5', 'baxh5', 'fast5', 'hdf5'],
+  'PIR'        => ['pir'],
+  'QSeq'       => ['qseq'],
+  'SAM'        => ['sam'],
+  'SFF'        => ['sff'],
+  'SRF'        => ['srf'],
+  'SnapGene'   => ['dna', 'seq'],
+  'SwissProt'  => ['dat'],
+  'VCF'        => ['vcf'],
+  'Plain'      => ['csv', 'txt'],
 ];
-#$ContainersGames = ['ISO', 'BIN-CUE', 'Installer', 'Loose'];
+
+# Imaging Formats
+# https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3948928/
+$ContainersGames = [
+  'Autofill'  => ['Autofill'],
+  'Analyze'   => ['hdr', 'img'],
+  'Interfile' => ['h33'],
+  'DICOM'     => ['dcm', 'dicom'],
+  'NIfTI'     => ['nii', 'nifti'],
+  'MINC'      => ['minc', 'mnc'],
+  'JPEG'      => ['jfif', 'jpeg', 'jpg'],
+  'JPEG 2000' => ['j2k', 'jp2', 'jpf', 'jpm', 'jpx', 'mj2'],
+  'PNG'       => ['png'],
+  'TIFF'      => ['tif', 'tiff'],
+  'WebP'      => ['webp'],
+  'Other'     => [''],
+];
+
+# Protein Formats
+# https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3518119/
+# DO NOT PARSE RAW FILES. TOO MANY COMPETING VENDORS
+$ContainersProt = [
+  'Autofill'       => ['Autofill'],
+  'ABI/Sciex'      => ['t2d', 'wiff'],
+  'APML'           => ['apml'],
+  'ASF'            => ['asf'],
+  'Agilent/Bruker' => ['baf', 'd', 'fid', 'tdf', 'yep'],
+  'BlibBuild'      => ['blib'],
+  'Bruker/Varian'  => ['sms', 'xms'],
+  'Finnigan'       => ['dat', 'ms'],
+  'ION-TOF'        => ['ita', 'itm'],
+  'JCAMP-DX'       => ['jdx'],
+  'MGF'            => ['mgf'],
+  'MS2'            => ['ms2'],
+  'MSF'            => ['msf'],
+  'mzData'         => ['mzdata'],
+  'mzML'           => ['mzml'],
+  'mzXML'          => ['mzxml'],
+  'OMSSA'          => ['omssa', 'omx'],
+  'PEFF'           => ['peff'],
+  'pepXML'         => ['pepxml'],
+  'protXML'        => ['protxml'],
+  'Shimadzu'       => ['lcd', 'qgd', 'spc'],
+  'Skyline'        => ['sky', 'skyd'],
+  'TPP/SPC'        => ['dta'],
+  'Tandem'         => ['tandem'],
+  'TraML'          => ['traml'],
+  'ULVAC-PHI'      => ['tdc'],
+  'Plain'          => ['csv', 'txt'],
+];
+
+$Archives = [
+  'Autofill' => ['Autofill'],
+  '7z'       => ['7z'],
+  'bzip2'    => ['bz2', 'bzip2'],
+  'gzip'     => ['gz', 'gzip', 'tgz', 'tpz'],
+  'Pickle'   => ['pickle', 'pkl'],
+  'RAR'      => ['rar', 'rev'],
+  'ZIP'      => ['zip', 'zipx'],
+  'None'     => [''],
+];
+#$ArchivesManga = ['cbz', 'cbr', 'cb7'];
+
+# Licenses
 $Codecs = [
   'CC BY',
   'CC BY-SA',
@@ -197,28 +319,26 @@ $Codecs = [
   'GNU LGPL',
   'GNU AGPL',
   'GNU FDL',
+  'MIT',
+  'ODC-By',
+  'ODC-ODbL',
   'OpenMTA',
   'Public Domain',
+  'Unspecified',
 ];
+
+# Assembly Levels
 $Resolutions = [
   'Contig',
   'Scaffold',
   'Chromosome',
   'Whole Genome',
+  'Other',
 ];
+
 #$AudioFormats = ['MP3', 'OGG', 'OGG 5.1', 'AAC', 'AAC 5.1', 'AC3', 'AC3 5.1', 'DTS 2.0', 'DTS 5.1', 'DTS-ES 6.1', 'FLAC 2.0', 'FLAC 5.1', 'FLAC 6.1', 'PCM 2.0', 'PCM 5.1', 'PCM 6.1', 'WMA', 'Real Audio', 'DTS-HD', 'DTS-HD MA'];
 #$Subbing = ['Softsubs', 'Hardsubs', 'RAW'];
 #$Languages = ['English', 'Japanese', 'Dual Language', 'None'];
-$Archives = [
-  '7z',
-  'bzip2',
-  'gzip',
-  'RAR',
-  'ZIP',
-  'None',
-];
-#$ArchivesManga = ['cbz', 'cbr', 'cb7'];
-
 #$Formats = ['MP3', 'FLAC', 'Ogg Vorbis', 'AAC', 'AC3', 'DTS'];
 #$Bitrates = ['192', 'APS (VBR)', 'V2 (VBR)', 'V1 (VBR)', '256', 'APX (VBR)', 'V0 (VBR)', 'q8.x (VBR)', '320', 'Lossless', '24bit Lossless', 'Other'];
 
@@ -226,7 +346,7 @@ $CollageCats = [
   0 => 'Personal',
   1 => 'Theme',
   2 => 'Staff Picks',
-  3 => 'Artists',
+  #3 => 'Artists',
 ];
 
 #$ReleaseTypes = [1=>'Album', 3=>'Soundtrack', 5=>'EP', 6=>'Anthology', 7=>'Compilation', 9=>'Single', 11=>'Live album', 13=>'Remix', 14=>'Bootleg', 15=>'Interview', 16=>'Mixtape', 21=>'Unknown'];
@@ -249,7 +369,7 @@ define('TAG_NAMESPACES', ['male', 'female', 'parody', 'character']);
 
 // God I wish I didn't have to do this but I just don't care anymore.
 define('AUTOMATED_BADGE_IDS', [
-  'DL'      => [
+  'DL' => [
     '8'     => 10,
     '16'    => 11,
     '32'    => 12,
@@ -260,7 +380,7 @@ define('AUTOMATED_BADGE_IDS', [
     '1024'  => 17,
     '2048'  => 18
   ],
-  'UL'      => [
+  'UL' => [
     '16'    => 30,
     '32'    => 31,
     '64'    => 32,
@@ -271,7 +391,7 @@ define('AUTOMATED_BADGE_IDS', [
     '2048'  => 37,
     '4096'  => 38
   ],
-  'Posts'   => [
+  'Posts' => [
     '25'    => 60,
     '50'    => 61,
     '100'   => 62,